
scluster_t
 Cluster structure: All models and sequences.

scluster_t

scluster_t_free
 Frees the memory allocated for a scluster_t struct.

scluster_out
 Writes out the final models.

scluster_avoid_empty_smodel
 Avoids empty models going out as outputs by assigning them a random sequence.

scluster_hmm
 Makes a cluster and reestimates the HMMs.

scluster_update
 Updates the cluster with additional sequences.

scluster_update_label
 Updates a label

scluster_print_likelihood
 Prints out the likelihood values for the cluster.

scluster_best_model
 Determines form an already calculated probability matrix, which model fits best to a certain sequence.

scluster_prob
 Calculates the logarithmic probability of sequences for a model.

scluster_random_labels
 Creates random labels for a vector of sequences

scluster_log_aposteriori
 Calculates the aposteriori prob.

scluster_print_header
 Prints the input vector for scluster_hmm
Alphabetic index
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