int* sviterbi

(smodel* smo, double* o, int T, double* log_p)

Viterbi algorithm: calculation of the viterbi path (best possible state sequenz for a given sequenz and a given model (smo)).

Documentation

Viterbi algorithm: calculation of the viterbi path (best possible state sequenz for a given sequenz and a given model (smo)). Also calculates logp according to this path, the matrices in the local_store struct are allocated using stat_matrix_d_alloc.

Parameters:

- smo model
o - double-sequence
T - sequence length
log_p - log(p) of the sequence using the vitberbi path

Returns:

Viterbi-path

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